This directory contains a set of Geant4-DNA examples.
Physics
- dnaphysics Simulation of track structures in liquid water using the Geant4-DNA physics processes and models.
- clustering Clustering application for direct damage extraction.
- icsd Use of cross section models for DNA materials,
- jetcounter A setup for simulation of a typical experiment with the Jet Counter nanodosemeter
- mfp Simulation of mean free path in liquid water.
- microdosimetry Simulation of the track of a 5 MeV proton in liquid water. Geant4 standard EM models are used in the World volume while Geant4-DNA models are used in a Target volume, declared as a Region.
- microprox Computation of proximity functions in liquid water
- microyz Simulation of microdosimetry spectra
- range Simulation of ranges.
- slowing Simulation of slowing down spectra.
- splitting Use of variance reduction to improve the computational efficiency of ionization.
- spower Simulation of stopping power.
- svalue Simulation of S-values in spheres of liquid water using the Geant4-DNA physics processes and models.
- wvalue Simulation of W-values in liquid water using the Geant4-DNA physics processes and models.
- AuNP Simulation calculates absorbed dose around AuNP.
Chemistry
- chem1 Simple activation of the chemistry module.
- chem2 Usage of TimeStepAction in the chemistry module.
- chem3 Activate the full interactivity with the chemistry module.
- chem4 Simulation of radiochemical yields with the chemistry module.
- chem5 Variation of chem4, using the contructors G4EmDNAPhysics_option8 and G4EmDNAChemistry_option1.
- chem6 Based on chem4 example, this example provides to score the radiochemical yield G.
- scavenger Activation of the scavenging process in chemistry.
- UHDR Ultra High Dose Rate.
Ultra High Dose Rate
Geometry and other
- pdb4dna Usage of the Protein Data Bank (PDB) file format to build geometries.
- wholeNuclearDNA Geometrical description of a full simplified cell nucleus.
- dnadamage1 Damage simulation on a chromatin fiber.
- dnadamage2 Scoring of plasmid DNA strand breaks using the IRT method.
- neuron Irradiation of a realistic neuron cell.
- moleculardna Damage simulation on DNA geometries.
See the README page inside each example for more detail.